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CIShell Manual
Pages
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Child pages
CIShell Powered Tools
Algorithms
Adjacency Transitivity
Aggregate Data
Annotate K-Coreness
Annotate K-Coreness (Unweighted & Directed)
Arc Reciprocity
Attach Citation Indices from Google Scholar
Attach Citation Table from Google Scholar
Average Shortest Path
Average Weight vs End-point Degree
Barabási-Albert Scale-Free
Bing Geocoder
Bipartite Network Graph
Blondel Community Detection
Burst Detection
Can
Chord
Circular Hierarchy
Clustering Coefficient
Congressional District Geocoder
Convert to Generic Publication
Create an R Instance
Create Document Source Merging Table
Create Merging Table
Custom Graph Query
Custom Table Query
Degree & Strength
Degree Distribution
Delete Isolates
Detect Duplicate Nodes
Diameter
Dichotomize
DrL (VxOrd)
Dyad Reciprocity
Edge Sampling
Extract Author Bibliographic Coupling Network
Extract Author Citation Network
Extract Author Co-Citation Network
Extract Author Paper Network
Extract Authors
Extract Authors by Year
Extract Authors by Year for Burst Detection
Extract Awards
Extract Bipartite Network
Extract Co-Author Network
Extract Co-Author Network (Text Files)
Extract Co-Occurrence Network
Extract Co-PI Network
Extract Directed Network
Extract Document Bibliographic Coupling Network
Extract Document Citation Network (Core and References)
Extract Document Citation Network (Core Only)
Extract Document Co-Citation Network
Extract Document Co-Citation Network (Core and References)
Extract Document Co-Citation Network (Core Only)
Extract Documents
Extract Documents by Year for Burst Detection
Extract Document Source Bibliographic Coupling Network
Extract Document Source Citation Network (Core and References)
Extract Document Source Citation Network (Core Only)
Extract Document Source Co-Citation Network (Core and References)
Extract Document Source Co-Citation Network (Core Only)
Extract Document Sources
Extract Edges Above or Below Value
Extract Investigators
Extract K-Core
Extract K-Core (Unweighted & Directed)
Extract Keywords
Extract Longitudinal Summary
Extract New ISI Keywords by Year
Extract New ISI Keywords by Year for Burst Detection
Extract Nodes Above or Below Value
Extract Organizations
Extract Original Author Keywords by Year
Extract Original Author Keywords by Year for Burst Detection
Extract Paper Citation Network
Extract Raw Tables from Database
Extract Reference Co-Occurrence (Bibliographic Coupling) Network
Extract References by Year
Extract References by Year for Burst Detection
Extract Top Edges
Extract Top N% Records
Extract Top Nodes
Extract Top N Records
Extract Weighted Document-Document Network
Extract Word Co-Occurrence Network
Extract ZIP Code
Facebook Access Token
Facebook Mutual Friends
Fast Pathfinder Network Scaling
Flickr Reader
Force Directed with Annotation (prefuse beta)
Fruchterman-Reingold with Annotation (prefuse beta)
Geocoder
Geospatial Visualization
Gephi
Get a Table from R
Global Connected Components
Google Citation User ID Search Algorithm
GUESS
HITS
Horizontal Bar Graph
Horizontal Bar Graph (not included version)
Hypergrid
Indegree Distribution
K-Nearest Neighbor
K-Nearest Neighbor (Java)
Load Existing Database
Load ISI File Into Database
Load ISI File with 'ISI flat format'
Load NSF File Into Database
Louvain Multilevel Refinement Community Detection
Lowercase, Tokenize, Stem, and Stopword Text
Map of Science via 554 Fields
Map of Science via Journals
Match References to Papers
Merge 2 Networks
Merge Document Sources
Merge Entities
Merge Identical ISI People
Merge Identical NSF People
MST-Pathfinder Network Scaling
Multipartite Joining
Nearest Neighbor Degree
Network Analysis Toolkit (NAT)
Node Betweenness Centrality
Node Degree
Node Indegree
Node Outdegree
Node Sampling
Outdegree Distribution
PageRank
Pathfinder Network Scaling
PRU
Radial Tree or Graph (prefuse alpha)
Radial Tree or Graph with Annotations (prefuse beta)
Random Graph
Randomize Weights
Read citation indices for a given set of authors
Reconcile Journal Names
Remove Edge Attributes
Remove ISI Duplicate Records
Remove Node Attributes
Remove Rows with Multitudinous Fields
Remove Self Loops
Run Rgui
Send a Table to R
Shortest Path Distribution
Single Node In-Out Degree Correlations
Louvain Community Detection
Slice Table by Time
SLM Community Detection
Snowball Sampling (N nodes)
Specified (Prefuse beta)
Strength Distribution
Strength vs Degree
Strong Component Clustering
Suggest ISI People Merges
Symmetrize
TARL (Topics, Aging and Recursive Linking)
Temporal Bar Graph
Tree Map (prefuse beta)
Tree View (prefuse beta)
Trim by Degree
Twitter Reader
Update Network by Merging Nodes
Watts-Strogatz Clustering Coefficient
Watts Strogatz Clustering Coefficient over K
Watts-Strogatz Small World
Weak Component Clustering
Weight Distribution
Workflow Module
Workflow Tracker
XML to CSV Algorithm
Yahoo! Geocoder
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Home
CIShell Powered Tools
Algorithms
Page Information
Title:
Algorithms
Author:
Micah Linnemeier
Jan 06, 2011
Last Changed by:
Michael Ginda
Feb 03, 2015
Tiny Link:
(useful for email)
https://wiki.cns.iu.edu/x/A4oh
Export As:
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CIShell Manual (2)
Page:
CIShell 2.0 Developer Documentation
Home page:
Home
Hierarchy
Parent Page
Page:
CIShell Powered Tools
Children (174)
Page:
Adjacency Transitivity
Page:
Aggregate Data
Page:
Annotate K-Coreness
Page:
Annotate K-Coreness (Unweighted & Directed)
Page:
Arc Reciprocity
Page:
Attach Citation Indices from Google Scholar
Page:
Attach Citation Table from Google Scholar
Page:
Average Shortest Path
Page:
Average Weight vs End-point Degree
Page:
Barabási-Albert Scale-Free
Show all...
Page:
Bing Geocoder
Page:
Bipartite Network Graph
Page:
Blondel Community Detection
Page:
Burst Detection
Page:
Can
Page:
Chord
Page:
Circular Hierarchy
Page:
Clustering Coefficient
Page:
Congressional District Geocoder
Page:
Convert to Generic Publication
Page:
Create an R Instance
Page:
Create Document Source Merging Table
Page:
Create Merging Table
Page:
Custom Graph Query
Page:
Custom Table Query
Page:
Degree & Strength
Page:
Degree Distribution
Page:
Delete Isolates
Page:
Detect Duplicate Nodes
Page:
Diameter
Page:
Dichotomize
Page:
DrL (VxOrd)
Page:
Dyad Reciprocity
Page:
Edge Sampling
Page:
Extract Author Bibliographic Coupling Network
Page:
Extract Author Citation Network
Page:
Extract Author Co-Citation Network
Page:
Extract Author Paper Network
Page:
Extract Authors
Page:
Extract Authors by Year
Page:
Extract Authors by Year for Burst Detection
Page:
Extract Awards
Page:
Extract Bipartite Network
Page:
Extract Co-Author Network
Page:
Extract Co-Author Network (Text Files)
Page:
Extract Co-Occurrence Network
Page:
Extract Co-PI Network
Page:
Extract Directed Network
Page:
Extract Document Bibliographic Coupling Network
Page:
Extract Document Citation Network (Core and References)
Page:
Extract Document Citation Network (Core Only)
Page:
Extract Document Co-Citation Network
Page:
Extract Document Co-Citation Network (Core and References)
Page:
Extract Document Co-Citation Network (Core Only)
Page:
Extract Documents
Page:
Extract Documents by Year for Burst Detection
Page:
Extract Document Source Bibliographic Coupling Network
Page:
Extract Document Source Citation Network (Core and References)
Page:
Extract Document Source Citation Network (Core Only)
Page:
Extract Document Source Co-Citation Network (Core and References)
Page:
Extract Document Source Co-Citation Network (Core Only)
Page:
Extract Document Sources
Page:
Extract Edges Above or Below Value
Page:
Extract Investigators
Page:
Extract K-Core
Page:
Extract K-Core (Unweighted & Directed)
Page:
Extract Keywords
Page:
Extract Longitudinal Summary
Page:
Extract New ISI Keywords by Year
Page:
Extract New ISI Keywords by Year for Burst Detection
Page:
Extract Nodes Above or Below Value
Page:
Extract Organizations
Page:
Extract Original Author Keywords by Year
Page:
Extract Original Author Keywords by Year for Burst Detection
Page:
Extract Paper Citation Network
Page:
Extract Raw Tables from Database
Page:
Extract Reference Co-Occurrence (Bibliographic Coupling) Network
Page:
Extract References by Year
Page:
Extract References by Year for Burst Detection
Page:
Extract Top Edges
Page:
Extract Top N% Records
Page:
Extract Top Nodes
Page:
Extract Top N Records
Page:
Extract Weighted Document-Document Network
Page:
Extract Word Co-Occurrence Network
Page:
Extract ZIP Code
Page:
Facebook Access Token
Page:
Facebook Mutual Friends
Page:
Fast Pathfinder Network Scaling
Page:
Flickr Reader
Page:
Force Directed with Annotation (prefuse beta)
Page:
Fruchterman-Reingold with Annotation (prefuse beta)
Page:
Geocoder
Page:
Geospatial Visualization
Page:
Gephi
Page:
Get a Table from R
Page:
Global Connected Components
Page:
Google Citation User ID Search Algorithm
Page:
GUESS
Page:
HITS
Page:
Horizontal Bar Graph
Page:
Horizontal Bar Graph (not included version)
Page:
Hypergrid
Page:
Indegree Distribution
Page:
K-Nearest Neighbor
Page:
K-Nearest Neighbor (Java)
Page:
Load Existing Database
Page:
Load ISI File Into Database
Page:
Load ISI File with 'ISI flat format'
Page:
Load NSF File Into Database
Page:
Louvain Multilevel Refinement Community Detection
Page:
Lowercase, Tokenize, Stem, and Stopword Text
Page:
Map of Science via 554 Fields
Page:
Map of Science via Journals
Page:
Match References to Papers
Page:
Merge 2 Networks
Page:
Merge Document Sources
Page:
Merge Entities
Page:
Merge Identical ISI People
Page:
Merge Identical NSF People
Page:
MST-Pathfinder Network Scaling
Page:
Multipartite Joining
Page:
Nearest Neighbor Degree
Page:
Network Analysis Toolkit (NAT)
Page:
Node Betweenness Centrality
Page:
Node Degree
Page:
Node Indegree
Page:
Node Outdegree
Page:
Node Sampling
Page:
Outdegree Distribution
Page:
PageRank
Page:
Pathfinder Network Scaling
Page:
PRU
Page:
Radial Tree or Graph (prefuse alpha)
Page:
Radial Tree or Graph with Annotations (prefuse beta)
Page:
Random Graph
Page:
Randomize Weights
Page:
Read citation indices for a given set of authors
Page:
Reconcile Journal Names
Page:
Remove Edge Attributes
Page:
Remove ISI Duplicate Records
Page:
Remove Node Attributes
Page:
Remove Rows with Multitudinous Fields
Page:
Remove Self Loops
Page:
Run Rgui
Page:
Send a Table to R
Page:
Shortest Path Distribution
Page:
Single Node In-Out Degree Correlations
Page:
Louvain Community Detection
Page:
Slice Table by Time
Page:
SLM Community Detection
Page:
Snowball Sampling (N nodes)
Page:
Specified (Prefuse beta)
Page:
Strength Distribution
Page:
Strength vs Degree
Page:
Strong Component Clustering
Page:
Suggest ISI People Merges
Page:
Symmetrize
Page:
TARL (Topics, Aging and Recursive Linking)
Page:
Temporal Bar Graph
Page:
Tree Map (prefuse beta)
Page:
Tree View (prefuse beta)
Page:
Trim by Degree
Page:
Twitter Reader
Page:
Update Network by Merging Nodes
Page:
Watts-Strogatz Clustering Coefficient
Page:
Watts Strogatz Clustering Coefficient over K
Page:
Watts-Strogatz Small World
Page:
Weak Component Clustering
Page:
Weight Distribution
Page:
Workflow Module
Page:
Workflow Tracker
Page:
XML to CSV Algorithm
Page:
Yahoo! Geocoder
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Recent Changes
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Editor
Feb 03, 2015 12:28
Michael Ginda
View Changes
Feb 03, 2015 12:27
Michael Ginda
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Feb 03, 2015 12:27
Michael Ginda
View Changes
Nov 04, 2013 12:02
Chin Hua Kong
View Changes
Migrated to Confluence 5.3
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View Page History
Outgoing Links
External Links (1)
cns-trac.slis.indiana.edu/trac/nwb/browser/trunk
Sci2 Manual (1)
Page:
3.1 Sci2 Algorithms and Tools
CIShell Manual (161)
Page:
Extract References by Year for Burst Detection
Page:
Symmetrize
Page:
Extract Authors
Page:
Bing Geocoder
Page:
TARL (Topics, Aging and Recursive Linking)
Page:
Merge Document Sources
Page:
Aggregate Data
Page:
Flickr Reader
Page:
Extract Authors by Year for Burst Detection
Page:
Lowercase, Tokenize, Stem, and Stopword Text
Page:
Dichotomize
Page:
Shortest Path Distribution
Page:
Extract Co-PI Network
Page:
Burst Detection
Page:
Adjacency Transitivity
Page:
DrL (VxOrd)
Page:
Snowball Sampling (N nodes)
Page:
Extract Document Citation Network (Core and References)
Page:
Extract ZIP Code
Page:
Choropleth Map
Page:
Custom Graph Query
Page:
Extract Original Author Keywords by Year for Burst Detection
Page:
Extract Edges Above or Below Value
Page:
Extract Document Sources
Page:
Node Outdegree
Page:
Edge Sampling
Page:
Extract Keywords
Page:
Extract Original Author Keywords by Year
Page:
Annotate K-Coreness
Page:
Nearest Neighbor Degree
Page:
Node Degree
Page:
Remove ISI Duplicate Records
Page:
HITS
Page:
Extract New ISI Keywords by Year
Page:
Watts-Strogatz Small World
Page:
Strength vs Degree
Page:
Radial Tree or Graph (prefuse alpha)
Page:
Horizontal Bar Graph (not included version)
Page:
Attach Citation Indices from Google Scholar
Page:
Randomize Weights
Page:
Congressional District Geocoder
Page:
Node Indegree
Page:
Yahoo! Geocoder
Page:
Send a Table to R
Page:
Extract Documents by Year for Burst Detection
Page:
Trim by Degree
Page:
Temporal Bar Graph
Page:
Geocoder
Page:
Extract Reference Co-Occurrence (Bibliographic Coupling) Network
Page:
Degree & Strength
Page:
Run Rgui
Page:
MST-Pathfinder Network Scaling
Page:
Extract New ISI Keywords by Year for Burst Detection
Page:
Facebook Access Token
Page:
CIShell 1.0 Documentation and Developer Resources
Page:
Facebook Friends Data
Page:
Merge 2 Networks
Page:
Force Directed with Annotation (prefuse beta)
Page:
K-Nearest Neighbor
Page:
Get a Table from R
Page:
Extract Bipartite Network
Page:
Extract Organizations
Page:
Fruchterman-Reingold with Annotation (prefuse beta)
Page:
Specified (Prefuse beta)
Page:
Extract Co-Author Network
Page:
Extract Word Co-Occurrence Network
Page:
Extract Document Citation Network (Core Only)
Page:
Remove Node Attributes
Page:
Tree View (prefuse beta)
Page:
Blondel Community Detection
Page:
Slice Table by Time
Page:
Attach Citation Table from Google Scholar
Page:
Single Node In-Out Degree Correlations
Page:
Extract Investigators
Page:
Circular Hierarchy
Page:
Chord
Page:
Update Network by Merging Nodes
Page:
Extract Author Bibliographic Coupling Network
Page:
Average Weight vs End-point Degree
Page:
Node Betweenness Centrality
Page:
Match References to Papers
Page:
Strong Component Clustering
Page:
Create an R Instance
Page:
Random Graph
Page:
Extract Document Source Bibliographic Coupling Network
Page:
Extract Author Paper Network
Page:
Extract Top N Records
Page:
Extract Document Bibliographic Coupling Network
Page:
Extract Top Nodes
Page:
Dyad Reciprocity
Page:
Extract Document Co-Citation Network (Core Only)
Page:
Extract Documents
Page:
Clustering Coefficient
Page:
Extract Weighted Document-Document Network
Page:
Extract Document Source Co-Citation Network (Core and References)
Page:
Extract Co-Occurrence Network
Page:
Indegree Distribution
Page:
Remove Rows with Multitudinous Fields
Page:
Extract Top N% Records
Page:
Weak Component Clustering
Page:
Delete Isolates
Page:
Strength Distribution
Page:
Global Connected Components
Page:
Proportional Symbol Map
Page:
Extract Longitudinal Summary
Page:
Average Shortest Path
Page:
Fast Pathfinder Network Scaling
Page:
Custom Table Query
Page:
Remove Edge Attributes
Page:
Extract Document Source Citation Network (Core and References)
Page:
Create Merging Table
Page:
Merge Identical NSF People
Page:
Google Citation User ID Search Algorithm
Page:
XML to CSV Algorithm
Page:
Network Analysis Toolkit (NAT)
Page:
Horizontal Bar Graph
Page:
Suggest ISI People Merges
Page:
Extract Author Citation Network
Page:
Gephi
Page:
Hypergrid
Page:
Tree Map (prefuse beta)
Page:
Extract Authors by Year
Page:
Extract Raw Tables from Database
Page:
Extract Author Co-Citation Network
Page:
Extract K-Core
Page:
Degree Distribution
Page:
Extract Document Co-Citation Network (Core and References)
Page:
Diameter
Page:
Can
Page:
Detect Duplicate Nodes
Page:
Pathfinder Network Scaling
Page:
Barabási-Albert Scale-Free
Page:
Extract Top Edges
Page:
Extract References by Year
Page:
GUESS
Page:
Watts Strogatz Clustering Coefficient over K
Page:
Extract Awards
Page:
Outdegree Distribution
Page:
Watts-Strogatz Clustering Coefficient
Page:
Twitter Reader
Page:
Multipartite Joining
Page:
Facebook Mutual Friends
Page:
Node Sampling
Page:
PRU
Page:
K-Nearest Neighbor (Java)
Page:
Arc Reciprocity
Page:
Merge Entities
Page:
Extract Document Source Co-Citation Network (Core Only)
Page:
Convert to Generic Publication
Page:
Merge Identical ISI People
Page:
Extract Document Co-Citation Network
Page:
Extract Nodes Above or Below Value
Page:
Reconcile Journal Names
Page:
Weight Distribution
Page:
PageRank
Page:
Extract Document Source Citation Network (Core Only)
Page:
Bipartite Network Graph
Page:
Extract Directed Network
Page:
Remove Self Loops
Page:
Extract Paper Citation Network
Page:
Radial Tree or Graph with Annotations (prefuse beta)
NWB Manual (1)
Page:
3.1 NWB Algorithms and Tools
Overview
Content Tools
Activity
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